• CLUSTAL

  • Referenced in 18 articles [sw12750]
  • pairwise sequence similarity scores, obtained using a fast pairwise alignment algorithm. Then the multiple alignment...
  • MyriMatch

  • Referenced in 3 articles [sw31817]
  • tandem mass spectra. Many of these algorithms score potential identifications by evaluating the number ... multiple intensity classes improves the discrimination of scoring. We compare MyriMatch results to those ... these algorithms. When minimal peak filtering is employed, performance plummets for a scoring model that...
  • Matching

  • Referenced in 19 articles [sw08094]
  • propensity score matching and for finding optimal balance based on a genetic search algorithm...
  • OXBench

  • Referenced in 7 articles [sw22988]
  • judged. RESULTS: The simple hierarchical multiple alignment algorithm, AMPS, performed as well as or better ... such as CLUSTALW once the PAM250 pair-score matrix was replaced by a BLOSUM series ... stems from improved pair-score matrices rather than algorithmic refinements. The maximum theoretical alignment accuracy...
  • bnstruct

  • Referenced in 4 articles [sw29260]
  • searches, and the Structural Expectation-Maximization algorithm. Available scoring functions are BDeu...
  • DeepWalk

  • Referenced in 63 articles [sw39604]
  • information. DeepWalk’s representations can provide F1 scores up to 10% higher than competing methods ... also scalable. It is an online learning algorithm which builds useful incremental results...
  • sscore

  • Referenced in 1 article [sw30579]
  • Bioconductor/R package sscore: S-Score Algorithm for Affymetrix Oligonucleotide Microarrays. This package contains an implementation ... Score algorithm as described by Zhang...
  • splithalfr

  • Referenced in 1 article [sw38253]
  • Reliabilities. Estimates split-half reliabilities for scoring algorithms of reaction time (RT) tasks and questionnaires ... splithalfr’ supports researcher-provided scoring algorithms, with six vignettes illustrating how on included datasets...
  • miCoPTCM

  • Referenced in 7 articles [sw31358]
  • account (using a corrected score approach or the SIMEX algorithm) or not the measurement error...
  • BioOptimizer

  • Referenced in 6 articles [sw17421]
  • BioOptimizer: A Bayesian scoring function approach to motif discovery. Motivation: Transcription factors (TFs) bind directly ... algorithms are more likely to be biologically relevant. Results: We derive a comprehensive scoring function ... length gaps. An algorithm called BioOptimizer is proposed to optimize this scoring function...
  • LMMPaper

  • Referenced in 1 article [sw40799]
  • Fisher scoring for crossed factor linear mixed models. The analysis of longitudinal, heterogeneous or unbalanced ... popular numerical optimization algorithms, such as Newton-Raphson, Fisher Scoring and expectation maximization to single ... algorithm classically used for single-factor LMM parameter estimation, Fisher Scoring, to multiple, crossed-factor ... compare five variants of the Fisher Scoring algorithm with one another, as well as against...
  • GpGp

  • Referenced in 1 article [sw31760]
  • /00401706.2018.1437476>. Model fitting employs a Fisher scoring algorithm described in Guinness...
  • MISIM

  • Referenced in 1 article [sw40144]
  • uses an extensible neural code similarity scoring algorithm, which can be used for various neural...
  • BENEDICT

  • Referenced in 13 articles [sw35868]
  • methodology for learning belief networks: BENEDICT. Previous algorithms for the construction of belief networks structures ... based either on independence criteria or on scoring metrics. The aim of this paper ... each one, and to develop two operative algorithms based on this methodology. Results...
  • Sketch2Photo

  • Referenced in 13 articles [sw14453]
  • algorithm to allow seamless image composition. Each blending result is given a numeric score, allowing...
  • Concerto

  • Referenced in 2 articles [sw24661]
  • design of their assessments. In-built algorithms for score calculation and report generation ensure...
  • EigenRank

  • Referenced in 15 articles [sw33329]
  • preference is represented by a rating score. Given a database of users’ past ratings ... items, traditional collaborative filtering algorithms are based on predicting the potential ratings that a user...
  • MIXREG

  • Referenced in 5 articles [sw24547]
  • estimation, utilizing both the EM algorithm and a Fisher-scoring solution. For the scoring solution...
  • REV2

  • Referenced in 3 articles [sw40657]
  • axioms to establish the interdependency between the scores, and then, formulate a mutually recursive definition ... develop the REV2 algorithm to calculate these intrinsic quality scores for all users, ratings...
  • DIAL

  • Referenced in 6 articles [sw13837]
  • similarity. DIAL provides access to three alignment algorithms: global (Needleman–Wunsch), local (Smith–Waterman ... zero suboptimal alignment score ratio is entered, then the semiglobal alignment algorithm may be used...