
PSIBLAST
 Referenced in 233 articles
[sw17324]
 decreased substantially while enhancing their sensitivity to weak similarities. A new criterion for triggering ... many cases is much more sensitive to weak but biologically relevant sequence similarities. PSIBLAST...

UTA Plus
 Referenced in 147 articles
[sw16225]
 utility functions within limits given by a sensitivity analysis of the ordinal regression problem. There...

ClustalW
 Referenced in 137 articles
[sw12016]
 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific...

SMOTE
 Referenced in 136 articles
[sw34239]
 good means of increasing the sensitivity of a classifier to the minority class. This paper...

SIMPLIcity
 Referenced in 87 articles
[sw14893]
 SIMPLIcity: Semanticssensitive integrated matching for picture libraries. We present here SIMPLIcity (semanticssensitive integrated...

Nek5000
 Referenced in 80 articles
[sw08064]
 mechanism as well as the region most sensitive to the instability: the wavemaker. We concentrate ... called linear global modes. In the structural sensitivity analysis these modes are associated...

MMACBETH
 Referenced in 103 articles
[sw16199]
 involving qualitative value scores and weights; Interactive sensitivity and robustness analyses. MACBETH (Measuring Attractiveness...

impute
 Referenced in 100 articles
[sw14376]
 appears to provide a more robust and sensitive method for missing value estimation than SVDimpute...

AVISPA
 Referenced in 88 articles
[sw03172]
 automated validation of Internet securitysensitive protocols and applications. It provides a modular and expressive...

ASA
 Referenced in 77 articles
[sw04736]
 annealing also permits adaptation to changing sensitivities in the multidimensional parameterspace. This annealing...

Stratego
 Referenced in 76 articles
[sw01259]
 dynamic rewrite rules for expressing contextsensitive transformations, thus supporting the development of transformation components...

DAKOTA
 Referenced in 74 articles
[sw05202]
 Design Optimization,Parameter Estimation, Uncertainty Quantification, and Sensitivity Analysis, The Dakota (Design Analysis...

PostgreSQL
 Referenced in 74 articles
[sw15935]
 localeaware for sorting, casesensitivity, and formatting. It is highly scalable both...

TAMC
 Referenced in 72 articles
[sw07198]
 Typical applications are data assimilation, model tuning, sensitivity analysis, and determination of singular vectors...

CVODES
 Referenced in 35 articles
[sw04946]
 form y’ = f(t,y,p) with sensitivity analysis capabilities (both forward and adjoint modes ... integration of the original ODEs, the sensitivity systems, or the adjoint system. Depending ... number of functional outputs, one of two sensitivity methods is more appropriate. The forward sensitivity ... result of which is the solution sensitivity. The gradient of any output function depending...

ROBPCA
 Referenced in 68 articles
[sw11592]
 data and hence is highly sensitive to outlying observations. Two robust approaches have been developed...

GRIMech 3.0
 Referenced in 66 articles
[sw07056]
 mechanism and target selection, and examining the sensitivity to the thermodynamics...

PatternHunter
 Referenced in 36 articles
[sw20963]
 PatternHunter: faster and more sensitive homology search. MOTIVATION: Genomics and proteomics studies routinely depend ... homology search techniques: increasing seed size decreases sensitivity whereas decreasing seed size slows down computation ... uses a novel seed model for increased sensitivity and new hitprocessing techniques for significantly ... increased speed. At Blast levels of sensitivity, PatternHunter is able to find homologies between sequences...

DASPK 3.0
 Referenced in 35 articles
[sw04288]
 Software and algorithms for sensitivity analysis of largescale differential algebraic systems. The authors describe ... software package DASPK 3.0 for the sensitivity analysis of largescale differential algebraic equations. They ... outline the underlying algorithms for the sensitivity analysis and for the choice of consistent initial...

Rapide
 Referenced in 38 articles
[sw01249]
 eventbased execution model of distributed, timesensitive systems  the ”timed poset model.” Posets provide ... correctness and performance analysis of distributed timesensitive systems...