• DENFIS

  • Referenced in 58 articles [sw24183]
  • demonstrated that DENFIS can effectively learn complex temporal sequences in an adaptive way and outperform...
  • FFTPACK

  • Referenced in 38 articles [sw11526]
  • periodic and other symmetric sequences. It includes complex, real, sine, cosine, and quarter-wave transforms...
  • Algorithm 644

  • Referenced in 55 articles [sw09113]
  • ordersv≥0 and complex z in −&pgr;sequence generation are auxiliary options...
  • RestoreTools

  • Referenced in 64 articles [sw04822]
  • implementing different data structures and algorithms. A complex set of computational methods is needed, each ... likely having different input parameters and calling sequences. This paper describes a set of Matlab...
  • PREvaIL

  • Referenced in 10 articles [sw25073]
  • side performance comparisons with seven modern sequence- and structure-based methods, showed that PREvaIL achieved ... valuable tool for both understanding the complex sequence-structure-function relationships of proteins and facilitating...
  • PurityFiltration

  • Referenced in 10 articles [sw07656]
  • using sophisticated methods such as bidualizing complexes, spectral sequences, associated cohomology, or Spencer cohomology used...
  • RepeatMasker

  • Referenced in 7 articles [sw17266]
  • sequences for interspersed repeats and low complexity DNA sequences. The output of the program...
  • SPADE

  • Referenced in 87 articles [sw02226]
  • problem make repeated database scans, and use complex hash structures which have poor locality. SPADE ... techniques, and using simple join operations. All sequences are discovered in only three database scans...
  • BSmooth

  • Referenced in 11 articles [sw23483]
  • measured using whole-genome bisulfite sequencing. However, cost, complexity of the data, and lack...
  • AiiDA

  • Referenced in 4 articles [sw27272]
  • workflow engine for the automation of complex sequences of simulations...
  • mdp

  • Referenced in 9 articles [sw14129]
  • combined into data processing sequences and more complex feed-forward network architectures. From the scientific...
  • SimBa

  • Referenced in 9 articles [sw28063]
  • diagram or barcodes of a sequence of Rips complexes built on P indexed...
  • Wirtinger Flow

  • Referenced in 77 articles [sw34175]
  • novel update rules, which have low computational complexity, much like in a gradient descent scheme ... minimal number of random measurements. Indeed, the sequence of successive iterates provably converges...
  • TETRA

  • Referenced in 12 articles [sw37891]
  • genomics, direct cloning and sequencing of genomic fragments from complex microbial communities has proven...
  • Quicksort

  • Referenced in 148 articles [sw20694]
  • algorithms are adaptive, i.e., they have a complexity analysis that is better for inputs, which ... number of inversions in the input sequence. This result provides a theoretical explanation...
  • MELTSIM

  • Referenced in 2 articles [sw35915]
  • hybridization and renaturation, determinations of sequence complexity, and sequence divergence. RESULTS: Good agreement is achieved...
  • ICON

  • Referenced in 9 articles [sw31159]
  • other hand. A sequence of tests with varying complexity indicates that the ICON dynamical core...
  • POIMs

  • Referenced in 2 articles [sw35360]
  • function prediction, is the classification of biological sequences. Frequently the most accurate classifiers are obtained ... training support vector machines (SVMs) with complex sequence kernels. However, a cumbersome shortcoming of SVMs...
  • ShrinkBayes

  • Referenced in 5 articles [sw13991]
  • analysis of count-based sequencing data in complex study designs...
  • InterPreTS

  • Referenced in 6 articles [sw35752]
  • Given a pair of query sequences, we first search for homologues in a database ... DBID) of known three-dimensional complex structures. Pairs of sequences homologous to a known interacting...