
Amelia
 Referenced in 42 articles
[sw04533]
 Data , Amelia II ”multiply imputes” missing data in a single crosssection (such ... Unlike Amelia I and other statistically rigorous imputation software, it virtually never crashes (but please...

ProbABEL
 Referenced in 6 articles
[sw10861]
 loci associated with complex traits. Currently, imputed single nucleotide polymorphisms (SNP) data are frequently used...

mvis
 Referenced in 11 articles
[sw37353]
 multiple multivariate imputations. uvis imputes missing values for a single variable as a function ... variety of regression models to a multiply imputed dataset, combining the estimates using Rubin...

CIDR
 Referenced in 7 articles
[sw32140]
 CIDR: Ultrafast and accurate clustering through imputation for singlecell RNAseq data. Most existing ... dimensionality reduction and clustering packages for singlecell RNAseq (scRNAseq) data deal with ... machinery. Here, we introduce CIDR (Clustering through Imputation and Dimensionality Reduction), an ultrafast algorithm that...

CNVassoc
 Referenced in 2 articles
[sw19389]
 common Copy Number Variants (CNVs) and imputed Single Nucleotide Polymorphisms (SNPs) in populationbased studies ... epistasis studies with pairs of CNVs or imputed SNPs. It has been optimized in order...

GWAF
 Referenced in 2 articles
[sw19000]
 between a batch of genotyped or imputed single nucleotide polymorphisms (SNPs) and a binary...

BaBooN
 Referenced in 1 article
[sw19481]
 Bootstrap Predictive Mean Matching  Multiple and Single Imputation for Discrete Data. Included are two variants ... focus is on imputing several variables at the same time. The suggestion ... Both variants can be run as ’single imputation’ versions, in case the analysis objective...

MMI_IMPUTE
 Referenced in 1 article
[sw42634]
 Multiple Imputation to Multilevel Data. Singlelevel multiple imputation procedures (e.g., PROC ... within clusters. Analyzing multilevel data imputed with a singlelevel procedure yields variance estimates that ... This paper describes a SAS macro, MMI_IMPUTE, that performs multiple imputation for clustered data ... model to generate imputations for lowerlevel incomplete variables, and uses singlelevel procedures similar...

XGobi
 Referenced in 37 articles
[sw11752]
 views thereof. Projection tools include dotplots of single variables, plots of pairs of variables ... their patterns can be examined; multiple imputations can be given to XGobi for rapid visual...

hmi
 Referenced in 2 articles
[sw19418]
 package hmi. Runs single level and multilevel imputation models. The user just has to pass...

R/qtl
 Referenced in 14 articles
[sw20451]
 genetic maps, identifying genotyping errors, and performing singleQTL genome scans ... algorithm), HaleyKnott regression, and multiple imputation. All of this may be done...

MIANALYZE
 Referenced in 3 articles
[sw24702]
 imputations and generates valid statistical inferences. Multiple imputation provides a useful strategy for analyzing data ... single value for each missing value, Rubin’s (1976, 1987) multiple imputation strategy replaces each...

FastImputation
 Referenced in 0 articles
[sw15646]
 object to impute (make a good guess at) missing data in a single line...

BAMD
 Referenced in 1 article
[sw17319]
 discover the underlying relationship between genotypes (usually Single Nucleotide Polymorphisms, or SNPs) and phenotypes (attributes ... contain missing values. Standard statistical methods either impute the missing values using relatively simple assumptions...

CytoBackBone
 Referenced in 1 article
[sw41270]
 proteins expressed by cells at the singlecell resolution. Several algorithms were developed in flow ... This algorithm is based on nearestneighbor imputation, but introduces the notion of acceptable...

clusterhap
 Referenced in 0 articles
[sw15285]
 haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL (Quantitative Trait Loci ... Thus, clusterhap groups individuals, that to be imputed, have a nonzero probability of having...

Macaulay2
 Referenced in 1958 articles
[sw00537]
 Macaulay2 is a software system devoted to supporting...

Maple
 Referenced in 5403 articles
[sw00545]
 The result of over 30 years of cutting...

Mathematica
 Referenced in 6445 articles
[sw00554]
 Almost any workflow involves computing results, and that...

Matlab
 Referenced in 13702 articles
[sw00558]
 MATLAB® is a highlevel language and interactive...