• dChipSNP

  • Referenced in 6 articles [sw18745]
  • microarrays allow genotyping of thousands of single-nucleotide polymorphisms (SNPs) in parallel. Recently, this technology ... report automated methods for pooling SNP array replicates to make LOH calls, visualizing...
  • PLASQ

  • Referenced in 6 articles [sw18746]
  • allelic dosage in cancer cells from SNP array data. Human cancer is largely driven ... class of such mutations is copy number polymorphisms, comprised of deviations from the normal diploid ... chromosomes in cancer cells from single-nucleotide polymorphism (SNP) microarray data. Our approach is based ... novel classification of probes on the array. As a result of this classification...
  • R

  • Referenced in 8836 articles [sw00771]
  • R is a language and environment for statistical...
  • Bioconductor

  • Referenced in 308 articles [sw04205]
  • Bioconductor provides tools for the analysis and comprehension...
  • oligo

  • Referenced in 9 articles [sw06102]
  • (R) A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon...
  • PICNIC

  • Referenced in 6 articles [sw20386]
  • PICNIC: an algorithm to predict absolute allelic copy...
  • CARAT

  • Referenced in 6 articles [sw35399]
  • CARAT: A novel method for allelic detection of...