• SimVascular

  • Referenced in 18 articles [sw25043]
  • SimVascular: An Open Source Pipeline for Cardiovascular Simulation. Patient-specific cardiovascular simulation has become ... fully open-source SimVascular software package, which provides a complete pipeline from medical image data ... planning and medical device design. The SimVascular software has recently been refactored and expanded ... components to create a fully open source pipeline. These developments foster advances in cardiovascular modeling...
  • bioperl

  • Referenced in 23 articles [sw10579]
  • bioinformatics applications (Run package), software to automate bioinformatic analyses (bioperl-pipeline) are all available...
  • Orca

  • Referenced in 7 articles [sw09792]
  • organized conceptually into segments of a pipeline. The software design takes advantage of the object ... Java language to open up the data pipeline, allowing developers to have greater control over...
  • VoxelPipe

  • Referenced in 3 articles [sw14878]
  • present a highly flexible and efficient software pipeline for programmable triangle voxelization. The pipeline, entirely...
  • Sehwa

  • Referenced in 9 articles [sw08111]
  • Sehwa: a software package for synthesis of pipelines from behavioral specification. A set of techniques...
  • MethylCoder

  • Referenced in 2 articles [sw35177]
  • MethylCoder: software pipeline for bisulfite-treated sequences. Motivation: MethylCoder is a software program that generates...
  • Crossbow

  • Referenced in 2 articles [sw34367]
  • Crossbow is a scalable software pipeline for whole genome resequencing analysis. It combines Bowtie...
  • HAL_

  • Referenced in 2 articles [sw07224]
  • grained level and the use of software pipelining. In this paper, we describe the design...
  • miRNAkey

  • Referenced in 1 article [sw29585]
  • miRNAkey - A software pipeline for the analysis of microRNA Deep Sequencing data. Deep Sequencing technologies ... mode of miRNA regulation. miRNAkey is a software package designed to be used...
  • ProteoAnnotator

  • Referenced in 1 article [sw31810]
  • ProteoAnnotator is a completely automated software pipeline for integration of mass spectrometry (MS) based proteomic...
  • GraphSpace

  • Referenced in 1 article [sw42198]
  • this library into a user’s software pipeline. Note: GraphSpace is moving into GeomStats python...
  • emba

  • Referenced in 1 article [sw35159]
  • simulation data results of the DrugLogics software pipeline which predicts synergistic drug combinations in cancer...
  • StreamTMC

  • Referenced in 1 article [sw07456]
  • three optimization phases. First, a software pipelining schedule is constructed to exploit the parallelism. Second...
  • SIMONE

  • Referenced in 10 articles [sw17978]
  • distribution. SIMONE software system is designed to be a valuable tool for: Pipeline system designers...
  • Anaconda

  • Referenced in 12 articles [sw24789]
  • software platform that enables organizations to develop, govern, and automate data science and AI pipelines...
  • G+Smo

  • Referenced in 48 articles [sw14372]
  • unified framework in the design and analysis pipeline. G+Smo is an object-oriented, cross ... providing access to high quality, open-source software to the forming isogeometric numerical simulation community...
  • JavaBERT

  • Referenced in 1 article [sw41373]
  • code. We introduce a data retrieval pipeline for software code and train a model upon...
  • Blender

  • Referenced in 20 articles [sw08125]
  • small studios who benefit from its unified pipeline and responsive development process. Examples from many ... collaborative tool: Blender is your own 3D software...
  • MethPipe

  • Referenced in 1 article [sw30174]
  • sequencing data. The MethPipe software package is a computational pipeline for analyzing bisulfite sequencing data ... RRBS). The MethPipe software package is a computational pipeline for analyzing bisulfite sequencing data (WGBS...