
ape
 Referenced in 55 articles
[sw04569]
 reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework ... such as Mantel’s test, minimum spanning tree, generalized skyline plots, graphical exploration of phylogenetic...

spdep
 Referenced in 33 articles
[sw04578]
 analysis, including regional aggregation by minimum spanning tree; a collection of tests for spatial autocorrelation...

GeoSteiner
 Referenced in 22 articles
[sw04320]
 currently the fastest program to calculate Steiner trees. It has been used to solve problems ... code for finding minimum spanning trees in arbitrary hyper graphs, which was applied ... Tree Problem in the Plane, Minimum Spanning Tree Problem in Hyper graphs The code...

STXXL
 Referenced in 17 articles
[sw06824]
 external memory algorithms for computing minimum spanning trees, connected components, breadthfirst search decompositions, constructing...

PhySIC
 Referenced in 8 articles
[sw08376]
 Contradiction). For k input trees spanning a set of n taxa, this method produces ... summarize consensual information of a set of trees and localize groups of taxa for which...

CNOP
 Referenced in 7 articles
[sw00139]
 curve approximation, minimum cost reliability constrained spanning trees and the table layout problem...

SAPPER
 Referenced in 5 articles
[sw18894]
 takes advantage of pregenerated random spanning trees and a carefully designed graph enumeration order...

FATTA
 Referenced in 2 articles
[sw22122]
 FATTA: Full automatic timespan tree analyzer. We developed a music analysis system called ... full automatic timespan tree analyzer (FATTA), which analyzes a piece of music based ... previously developed an automatic timespan tree analyzer (ATTA), which can acquire a timespan ... stability of the timespan tree. Experimental results showed that the performance of FATTA outperformed...

sigma GTTM
 Referenced in 2 articles
[sw22132]
 σGTTM III: Learning based Timespan Tree Generator based on PCFG. We propose an automatic ... analyzer for acquiring a timespan tree based on the generative theory of tonal music ... analyze them properly. We reformalized the timespan reduction in GTTM based on a statistical ... acquire the most probabilistic timespan tree. We applied leaveoneout cross validation using...

GIGA
 Referenced in 3 articles
[sw29606]
 genomic age: namely, a reliable species tree spanning much of the tree of life...

gSkeletonClu
 Referenced in 3 articles
[sw30861]
 DensityBased Network Clustering via StructureConnected Tree Division or Agglomeration. Community detection ... network to its CoreConnected Maximal Spanning Tree (CCMST), the network clustering problem is converted...

mst_clustering
 Referenced in 1 article
[sw29188]
 clustering: Clustering via Euclidean Minimum Spanning Trees. Scikitlearn style estimator for Minimum Spanning Tree ... based on a trimmed Euclidean Minimum Spanning Tree, can be useful in this case...

AS 13
 Referenced in 2 articles
[sw03909]
 Algorithm AS 13. Minimum spanning tree...

RNACluster
 Referenced in 2 articles
[sw23124]
 base pair distance, mountain distance, morphological distance, tree edit distance, string edit distance ... ensemble clustering using a minimum spanning tree (MST) based algorithm. RNACluster can be used...

MiSTree
 Referenced in 1 article
[sw30562]
 package for constructing and analysing Minimum Spanning Trees. The minimum spanning tree (MST), a graph...

CciMST
 Referenced in 1 article
[sw31403]
 clustering algorithm based on minimum spanning tree and cluster centers. The minimum spanning tree...

mcMST
 Referenced in 1 article
[sw29266]
 Toolbox for the MultiCriteria Minimum Spanning Tree Problem. Algorithms to approximate the Paretofront ... multicriteria minimum spanning tree problems. Additionally, a modular toolbox for the generation of multi...

AS 40
 Referenced in 1 article
[sw03907]
 Algorithm AS 40. Updating a minimum spanning tree...

AS 14
 Referenced in 1 article
[sw03910]
 Algorithm AS 14. Printing the minimum spanning tree...

pyvine
 Referenced in 1 article
[sw38439]
 vine structure which maximizes the vine tree dependence, i.e., the sum of the absolute values ... edges using PRIM algorithm of minimumspanningtree in a sequential way. The maximum likelihood...