
PMA
 Referenced in 114 articles
[sw19126]
 Analysis: a penalized matrix decomposition, sparse principal components analysis, and sparse canonical correlation analysis, described ... decomposition, with applications to sparse principal components and canonical correlation analysis. Biostatistics ... Witten and Tibshirani (2009) Extensions of sparse canonical correlation analysis, with applications to genomic data...

mixOmics
 Referenced in 29 articles
[sw09508]
 Recent methodological developments include: sparse PLSDiscriminant Analysis, Independent Principal Component Analysis and multilevel analysis...

SOFAR
 Referenced in 5 articles
[sw31665]
 with sparse singular value decomposition, sparse principal component analysis, sparse factor analysis, and spare vector...

irlba
 Referenced in 7 articles
[sw21041]
 Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices. Fast and memory ... singular value decomposition and principal components analysis of large sparse and dense matrices...

OptimalSPCA
 Referenced in 2 articles
[sw31821]
 Certifiably optimal sparse principal component analysis. This paper addresses the sparse principal component analysis (SPCA...

sparsepca
 Referenced in 1 article
[sw31562]
 package sparsepca: Sparse Principal Component Analysis (SPCA). Sparse principal component analysis (SPCA) attempts to find ... approach provides better interpretability for the principal components in highdimensional data settings. This...

GSPPCA
 Referenced in 4 articles
[sw25977]
 globally sparse probabilistic PCA. Sparse versions of principal component analysis (PCA) have imposed themselves ... unsupervised manner. However, when several sparse principal components are computed, the interpretation of the selected...

spca_am
 Referenced in 1 article
[sw25022]
 Sparse Principal Component Analysis Using Alternating Maximization, spca_am: This is a Sparse Principal Component...

scPCA
 Referenced in 1 article
[sw32451]
 Bioconductor /R package scPCA: Sparse Contrastive Principal Component Analysis. A toolbox for sparse contrastive principal ... scPCA combines the stability and interpretability of sparse PCA with contrastive PCA’s ability...

SpaSM
 Referenced in 5 articles
[sw23903]
 Matlab toolbox for performing sparse regression, classification and principal component analysis. The toolbox has been...

s4vdpca
 Referenced in 1 article
[sw34285]
 package implements methods for sparse principal component analysis as described in the Bioinformatics article: Applying ... Stability Selection to Consistently Estimate Sparse Principal Components in HighDimensional Molecular Data...

RadioiBAG
 Referenced in 1 article
[sw32135]
 involves several innovative strategies: it incorporates integrative analysis of multiplatform genomic data sets ... also introduce the use of sparse Principal Component Analysis (sPCA) to extract a sparse...

refund
 Referenced in 54 articles
[sw07434]
 using principal components. Functional principal components (FPC) analysis is widely used to decompose and express ... implemented to understand the uncertainty in principal component decomposition quantities. Our method compares favorably ... simulation studies that include both densely and sparsely observed functions. We apply our method...

sparseFLMM
 Referenced in 2 articles
[sw21042]
 irregularly or sparsely sampled data based on functional principal component analysis...

fdapace
 Referenced in 3 articles
[sw15968]
 Functional Principal Component Analysis (FPCA), a key technique for functional data analysis, for sparsely ... random trajectories and time courses, via the Principal Analysis by Conditional Estimation (PACE) algorithm...

Bubbles
 Referenced in 8 articles
[sw08870]
 independent component analysis, which can be estimated by maximization of the sparsenesses of linear filter ... outputs. This leads to the emergence of principal simple cell properties. Alternatively, simple cell properties...

PACE
 Referenced in 2 articles
[sw24632]
 Functional Principal Component Analysis (FPCA), a key technique for functional data analysis, for sparsely ... random trajectories and time courses, via the Principal Analysis by Conditional Estimation (PACE) algorithm...

PACE
 Referenced in 1 article
[sw28690]
 Functional Principal Component Analysis (FPCA), a key technique for functional data analysis, for sparsely ... random trajectories and time courses, via the Principal Analysis by Conditional Estimation (PACE) algorithm. PACE...

rpca
 Referenced in 1 article
[sw29201]
 sparse component. Candes, E. J., Li, X., Ma, Y., & Wright, J. (2011). Robust principal component ... analysis?. Journal of the ACM (JACM), 58(3), 11. prove that we can recover each ... component individually under some suitable assumptions. It is possible to recover both the lowrank ... sparse components exactly by solving a very convenient convex program called Principal Component Pursuit; among...

dyndimred
 Referenced in 2 articles
[sw33012]
 reduction methods, such as Principal Component Analysis (’PCA’), Independent Component Analysis (’ICA’), diffusion maps, Locally ... Projection (’UMAP’). Has builtin support for sparse matrices...