
PhaseLift
 Referenced in 219 articles
[sw31783]
 very simple structured illumination patterns such that three diffracted figures uniquely determine the phase...

SnapPea
 Referenced in 163 articles
[sw06873]
 used to determine which of the remaining gluings in fact admit hyperbolic structures, to remove...

SDPT3
 Referenced in 697 articles
[sw04009]
 cones. This includes the special case of determinant maximization problems with linear matrix inequalities ... SeDuMi format. Sparsity and block diagonal structure are exploited. We also exploit lowrank structures...

DAISY
 Referenced in 49 articles
[sw09059]
 observations and errorfree model structure). Of course, determining if the parameters can be uniquely...

DIMACS
 Referenced in 571 articles
[sw08221]
 DIMACS Implementation Challenges address questions of determining realistic algorithm performance where worst case analysis ... many assumptions about implementation methods and data structures. It provides an opportunity to develop...

RELION
 Referenced in 19 articles
[sw22792]
 Bayesian approach to cryoEM structure determination. RELION, for REgularized LIkelihood OptimizatioN, is an open ... computer program for the refinement of macromolecular structures by singleparticle analysis of electron cryo ... relative orientations of individual particles may be determined. A socalled goldstandard Fourier shell...

CNS
 Referenced in 10 articles
[sw30617]
 software suite for macromolecular structure determination. A new software suite, called Crystallography & NMR System ... been developed for macromolecular structure determination by Xray crystallography or solution nuclear magnetic resonance ... spectroscopy. In contrast to existing structuredetermination programs the architecture of CNS is highly flexible ... allowing for extension to other structuredetermination methods, such as electron microscopy and solidstate...

Ada95
 Referenced in 293 articles
[sw01753]
 structured, statically typed, imperative, widespectrum, and objectoriented highlevel computer programming language, extended ... synchronous message passing, protected objects, and nondeterminism. Ada is an international standard; the current...

Daesa
 Referenced in 13 articles
[sw14290]
 Structural Analyzer, is a MATLAB tool for structural analysis of differentialalgebraic equations (DAEs ... index, and of any order. It determines structural index, number of degrees of freedom, constraints...

iBP
 Referenced in 7 articles
[sw30618]
 interval branchandprune for protein structure determination. The interval branch and prune ... powerful method for molecular structure determination. However, substantial obstacles still must be overcome before ... tractable generalpurpose alternative to existing structure determination algorithms. This work introduces an iterative variant ... algorithm that leverages existing knowledge of protein structures in order to reduce the size...

PREvaIL
 Referenced in 10 articles
[sw25073]
 using sequence, structural, and network features in a machinelearning framework. Determining the catalytic residues ... understanding the relationship between protein sequence, structure, function, and enhancing our ability to design novel ... sequenced, and their primary and tertiary structures determined, experimental methods for enzyme functional characterization ... residues and helping to bridge the sequencestructurefunction gap. In this study, we describe...

AMBRE
 Referenced in 30 articles
[sw00038]
 package MB for the determination of its singularity structure in ϵ. The AMBRE package contains...

NoDoSE
 Referenced in 13 articles
[sw17614]
 interactive tool for semiautomatically determining the structure of such documents and then extracting their ... format of a document has been determined, its data can be extracted into a number ... used as a test bed for structure mining algorithms in general, and the mining algorithms...

cryoSPARC
 Referenced in 8 articles
[sw39533]
 algorithms for rapid unsupervised cryoEM structure determination. CryoSPARC combines powerful innovations in 3D reconstruction ... cryoEM workflow. Rapidly solve highresolution structures of biologically important targets, with advanced tools...

ELIAS
 Referenced in 8 articles
[sw04907]
 describe some basic algorithms for the structure determination of Lie algebras. They are implemented...

ePCA
 Referenced in 8 articles
[sw27830]
 needed for denoising and for structure determination. However, the standard method, Principal Component Analysis...

Rate4Site
 Referenced in 7 articles
[sw35756]
 determinants within their homologues. Motivation: A number of proteins of known threedimensional (3D) structure ... light of the recent progress in structure determination methodology, this number is likely to increase ... homologues whose 3Dstructure is known. Functionally important regions often correspond to surface patches...

Mauve
 Referenced in 16 articles
[sw24606]
 nine enterobacterial genomes and to determine global rearrangement structure in three mammalian genomes. We have...

PSICO
 Referenced in 10 articles
[sw10910]
 constraintbased approach to determining protein structures compatible with distance constraints obtained from Nuclear Magnetic...

TestU01
 Referenced in 120 articles
[sw08033]
 interaction between a specific test and the structure of the point sets produced ... given class of random number generators, to determine how large should be the sample size...