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CentroidAlign
- Referenced in 2 articles
[sw17119]
- structured RNAs by maximizing expected sum-of-pairs score. Motivation: The importance of accurate ... sequences. This maximizes the expected sum-of-pairs score (SPS) of a predicted alignment under...
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Footprinter
- Referenced in 9 articles
[sw09003]
- FootPrinter: a program designed for phylogenetic footprinting. Phylogenetic...
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DIALIGN
- Referenced in 34 articles
[sw12015]
- DIALIGN: multiple DNA and protein sequence alignment at...
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MEME
- Referenced in 13 articles
[sw15711]
- MEME: discovering and analyzing DNA and protein sequence...
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BLAT
- Referenced in 36 articles
[sw16891]
- BLAT — The BLAST-Like Alignment Tool. Analyzing vertebrate...
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LocARNAscan
- Referenced in 2 articles
[sw23118]
- LocARNAscan: incorporating thermodynamic stability in sequence and structure...
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MergeAlign
- Referenced in 2 articles
[sw24604]
- MergeAlign is a program that constructs a consensus...