• maSigPro

  • Referenced in 11 articles [sw11024]
  • course microarray experiments. Motivation: Multi-series time-course microarray experiments are useful approaches for exploring ... frequently interested in studying gene expression changes along time and in evaluating trend differences between ... data analysis. Results: In this work, we propose a statistical procedure to identify genes ... that show different gene expression profiles across analytical groups in time-course experiments. The method...
  • PTA

  • Referenced in 1 article [sw09307]
  • analysis for time-course data with applications in genomic medicine. Time-course high-throughput gene ... expression data are emerging in genomic and translational medicine. Extracting interesting time-course patterns from ... principal trend analysis (PTA) to extract principal trends of time-course gene expression data from ... show that PTA can extract interesting time-course trends with biological significance, which helps understanding...
  • TGCnA

  • Referenced in 1 article [sw41317]
  • coexpression network analysis using a low-rank plus sparse framework. Various gene network models with ... genes due to severe computational bottlenecks and sample size limitation. Although the correlation-based gene ... gene expression time-course data. We proposed Temporal Gene Coexpression Network Analysis (TGCnA) framework...
  • FUNNEL

  • Referenced in 2 articles [sw34200]
  • functional principal component analysis, and disentangles the effects of overlapping genes by a functional extension ... regression. Furthermore, the hypothesis testing for the gene sets is performed by an extension ... datasets and a large-scale time-course gene expression data on human influenza infection...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • WinBUGS

  • Referenced in 771 articles [sw04492]
  • WinBUGS is part of the BUGS project, which...
  • fda (R)

  • Referenced in 1531 articles [sw04511]
  • fda: Functional Data Analysis , These functions were developed...
  • SIMoNe

  • Referenced in 6 articles [sw06067]
  • simone: Statistical Inference for MOdular NEtworks (SIMoNe) , The...
  • SemiPar

  • Referenced in 758 articles [sw07116]
  • R package SemiPar: Semiparametic Regression. The primary aim...
  • BNT

  • Referenced in 72 articles [sw07384]
  • The Bayes Net Toolbox (BNT) is an open...
  • ORIOGEN

  • Referenced in 16 articles [sw07654]
  • Adaptive choice of the number of bootstrap samples...
  • SLEX

  • Referenced in 18 articles [sw08605]
  • Discrimination and Classification of Nonstationary Time Series Using...
  • astsa

  • Referenced in 288 articles [sw11006]
  • astsa: Applied Statistical Time Series Analysis. Data sets...
  • TETRAD

  • Referenced in 440 articles [sw12177]
  • TETRAD is a program which creates, simulates data...
  • AAindex

  • Referenced in 47 articles [sw26861]
  • AAindex: amino acid index database. AAindex is a...
  • SWIFT

  • Referenced in 2 articles [sw26872]
  • SWIFT (sequence-wide investigation with Fourier transform): a...
  • PRED-CLASS

  • Referenced in 5 articles [sw26873]
  • PRED-CLASS: cascading neural networks for generalized protein...
  • BGRMI

  • Referenced in 2 articles [sw29320]
  • BGRMI: A method for inferring gene regulatory networks...
  • HdBCS

  • Referenced in 81 articles [sw29884]
  • HdBCS - High-dimensional Bayesian Covariance Selection. This site...