• FastTree

  • Referenced in 9 articles [sw28979]
  • uses the Jukes-Cantor or generalized time-reversible (GTR) models of nucleotide evolution...
  • GniCodes

  • Referenced in 9 articles [sw21086]
  • conserved quantities. Conservative systems have a time-reversible flow. Differential equations with first integrals...
  • Recodon

  • Referenced in 3 articles [sw35372]
  • extension to the general time-reversible model of nucleotide substitution with a proportion of invariable...
  • IBCN

  • Referenced in 3 articles [sw03452]
  • general theory applicable to superposed, time-reversible Markovian Rate Process are given. These refer...
  • seekpath

  • Referenced in 0 articles [sw37660]
  • HPKOT paper is returned. Systems without time-reversal and inversion-symmetry are also properly taken...
  • Maple

  • Referenced in 5403 articles [sw00545]
  • The result of over 30 years of cutting...
  • Matlab

  • Referenced in 13702 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • SINGULAR

  • Referenced in 1522 articles [sw00866]
  • SINGULAR is a Computer Algebra system (CAS) for...
  • Hemelb

  • Referenced in 13 articles [sw01043]
  • HemeLB: A high performance parallel lattice-Boltzmann code...
  • SPPARKS

  • Referenced in 8 articles [sw04146]
  • SPPARKS, an acronym for Stochastic Parallel PARticle Kinetic...
  • AUTO2000

  • Referenced in 52 articles [sw04643]
  • AUTO is a software for continuation and bifurcation...
  • DLMF

  • Referenced in 2889 articles [sw04968]
  • NIST digital library of mathematical functions. The National...
  • Kaleido

  • Referenced in 8 articles [sw05940]
  • Uniform solution for uniform polyhedra. A uniform polyhedron...
  • MrBayes

  • Referenced in 62 articles [sw07715]
  • MrBayes: Bayesian Inference of Phylogeny. MrBayes is a...
  • MUPHY

  • Referenced in 16 articles [sw10447]
  • MUPHY: A parallel multi physics/scale code for high...
  • primdec

  • Referenced in 76 articles [sw10977]
  • Singular library for computing the primary decomposition and...
  • ASTRAL-II

  • Referenced in 11 articles [sw20492]
  • ASTRAL-II: coalescent-based species tree estimation with...
  • ImageNet

  • Referenced in 695 articles [sw21105]
  • ImageNet is an image dataset organized according to...
  • Adam

  • Referenced in 948 articles [sw22205]
  • Adam: A Method for Stochastic Optimization. We introduce...
  • STEM-hy

  • Referenced in 7 articles [sw23618]
  • STEM: species tree estimation using maximum likelihood for...