• Gudhi

  • Referenced in 43 articles [sw08777]
  • interest for computational topology is topological data analysis, where one is interested in learning topological...
  • CliqueTop

  • Referenced in 29 articles [sw29766]
  • collection of matlab scripts for doing topological analysis of symmetric matrices. The syntax for using...
  • top.m

  • Referenced in 244 articles [sw22630]
  • presents a compact Matlab implementation of a topology optimization code for compliance minimization of statically ... lines associated with output and finite element analysis, it is shown that only 49 Matlab ... required for solving a well-posed topology optimization problem. By adding three additional lines...
  • PersistenceImages

  • Referenced in 40 articles [sw41418]
  • underlying space, and tools from topological data analysis can characterize this structure for the purpose ... vector machines, which identify features containing discriminating topological information. Finally, high accuracy inference of parameter...
  • HAP

  • Referenced in 40 articles [sw04870]
  • complexes in the context of topological data analysis...
  • CHomP

  • Referenced in 51 articles [sw09358]
  • efficient. Algebraic Topology is the classical mathematical tool for the global analysis of nonlinear spaces ... apply efficient and effective topologically based methods to the analysis of nonlinear systems...
  • Persistence Landscape

  • Referenced in 18 articles [sw21260]
  • persistence landscapes toolbox for topological statistics. Topological data analysis provides a multiscale description ... statistics and machine learning with topological data analysis. We present an experiment showing that...
  • PolyTop

  • Referenced in 45 articles [sw07629]
  • present an efficient Matlab code for structural topology optimization that includes a general finite element ... features a modular structure in which the analysis routine and the optimization algorithm are separated ... topology optimization formulation. Within this framework, the finite element and sensitivity analysis routines contain ... unstructured meshes and arbitrary design domains in topology optimization that have received little attention...
  • TDA

  • Referenced in 24 articles [sw15508]
  • package TDA: Statistical Tools for Topological Data Analysis. Tools for the statistical analysis of persistent...
  • SLMC

  • Referenced in 74 articles [sw04604]
  • analysis focuses on properties related to resource usage, localities, interference, mobility, or topology ... currently available tool that supports the combined analysis of behavioral and spatial properties of systems...
  • GeoFEM

  • Referenced in 23 articles [sw00338]
  • parameter values based on the analysis of scalar/flow field topology and volumetric coherence, to improve...
  • Topology ToolKit

  • Referenced in 6 articles [sw34711]
  • source library and software collection for topological data analysis and visualization. TTK can handle scalar ... robust implementations of key algorithms in topological data analysis...
  • SimBa

  • Referenced in 10 articles [sw28063]
  • persistence via Simplicial Batch collapse. In topological data analysis, a point cloud data P extracted...
  • TDAstats

  • Referenced in 3 articles [sw31276]
  • package TDAstats: Pipeline for Topological Data Analysis. A comprehensive toolset for any useR conducting topological ... data analysis, specifically via the calculation of persistent homology in a Vietoris-Rips complex ... background on computing persistent homology for topological data analysis, see Otter ... used for nonparametric statistical inference in topological data analysis, read Robinson & Turner...
  • jHoles

  • Referenced in 7 articles [sw15020]
  • persistent homology. Complex networks equipped with topological data analysis are one of the promising tools...
  • RIVET

  • Referenced in 6 articles [sw27770]
  • RIVET is a tool for topological data analysis, and more specifically, for the visualization...
  • ExPASy

  • Referenced in 14 articles [sw34228]
  • PROSITE, ENZYME and the SWISS-MODEL repository. Analysis tools are available for specific tasks relevant ... translational modification prediction, topology prediction, primary, secondary and tertiary structure analysis and sequence alignment. These...
  • VRA

  • Referenced in 3 articles [sw14986]
  • software package for topological analysis, qualitative and quantitative assessment, and nonparametric prediction of nonlinear...
  • apTreeshape

  • Referenced in 9 articles [sw31620]
  • Phylogenetic Treeshape. Simulation and analysis of phylogenetic tree topologies using statistical indices...
  • Fullerene

  • Referenced in 9 articles [sw15046]
  • generate any fullerene isomer, perform topological and graph theoretical analysis, as well as calculate...