• latentnet

  • Referenced in 18 articles [sw10550]
  • latent position model and a two-stage maximum likelihood method for the latent position cluster ... model via posterior predictive checks. It has a function to simulate networks from a latent...
  • FunSAV

  • Referenced in 0 articles [sw25091]
  • FunSAV: predicting the functional effect of single amino acid variants using a two-stage random ... genetic variations associated with human disease. Successful prediction of the functional impact of SAVs from ... built a two-stage random forest (RF) model, termed as FunSAV, to predict the functional...
  • MetaPSICOV

  • Referenced in 1 article [sw17012]
  • required. To extend the usefulness of contact prediction, we have designed a new meta-predictor ... sequence alignment. Finally, we use a two-stage predictor, where the second stage filters ... This two-stage predictor is additionally evaluated on its ability to accurately predict the long...
  • SOLpro

  • Referenced in 2 articles [sw35298]
  • groups of features computed directly or predicted (e.g. secondary structure) from the primary sequence ... features are used to train a two-stage support vector machine (SVM) architecture. The resulting...
  • CONTRAST

  • Referenced in 1 article [sw23029]
  • approach to multiple informant de novo gene prediction. We describe CONTRAST, a gene predictor which ... novel training algorithm. We use a two-stage approach, in which a set of binary ... global model of gene structure. CONTRAST predicts exact coding region structures for 65% more human...
  • TANDEM

  • Referenced in 1 article [sw15865]
  • package TANDEM. A two-stage regression method that can be used when various input data ... gene expression and methylation in drug response prediction. In the first stage it uses...
  • CONFOLD

  • Referenced in 1 article [sw17008]
  • method to build three-dimensional models using predicted contacts and secondary structures. Our method first ... reconstruct final structural models. This unique two-stage modeling approach of integrating contacts and secondary ... other algorithms. We validate our method on two standard benchmark datasets using true contacts ... two datasets, respectively. On the dataset for benchmarking reconstructions methods with predicted contacts and secondary...
  • ANSYS

  • Referenced in 665 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • GAUSS

  • Referenced in 119 articles [sw00322]
  • The GAUSS Mathematical and Statistical System is a...
  • InterViewer

  • Referenced in 28 articles [sw00443]
  • InterViewer: Dynamic visualization of protein-protein interactions From...
  • LAPACK

  • Referenced in 1648 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...
  • Maple

  • Referenced in 5177 articles [sw00545]
  • The result of over 30 years of cutting...
  • Mathematica

  • Referenced in 6075 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 12557 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • PARI/GP

  • Referenced in 604 articles [sw00680]
  • PARI/GP is a widely used Computer Algebra System...
  • R

  • Referenced in 8776 articles [sw00771]
  • R is a language and environment for statistical...
  • ScaLAPACK

  • Referenced in 407 articles [sw00830]
  • ScaLAPACK is an acronym for scalable linear algebra...
  • SCIP

  • Referenced in 484 articles [sw01091]
  • SCIP is currently one of the fastest non...
  • SYSTAT

  • Referenced in 13 articles [sw01115]
  • SYSTAT hat alles, was Sie für die statistische...