E-Surge

Program E-Surge: A Software Application for Fitting Multievent Models. Multievent models (Pradel 2005, 2008) handle state uncertainty, and they therefore cover a range of situations like hidden capture heterogeneity and sex determination from behaviour which cannot be treated in the multistate paradigm. We introduce a new software application called e-surge, built upon the concepts developed in program m-surge (Choquet et al. 2004) to encompass this new class of capture–recapture models. It also improves on m-surge by allowing the decomposition of transitions into several steps. We present the new concepts involved, notably the event and the multistep process, and how they are implemented in e-surge. We then illustrate the use of e-surge with three examples. One example deals with breeding propensity where the breeding state cannot always be ascertained; a further deals with emigration which is considered as a two-step process (Grosbois and Tavecchia 2003) and the last one with a version of a memory model where survival can be handled directly.


References in zbMATH (referenced in 12 articles )

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  1. Worthington, Hannah; McCrea, Rachel S.; King, Ruth; Griffiths, Richard A.: Estimation of population size when capture probability depends on individual states (2019)
  2. Jeyam, Anita; McCrea, Rachel S.; Bregnballe, Thomas; Frederiksen, Morten; Pradel, Roger: A test of positive association for detecting heterogeneity in capture for capture-recapture data (2018)
  3. Anguelov, Roumen; Dufourd, Claire; Dumont, Yves: Simulations and parameter estimation of a trap-insect model using a finite element approach (2017)
  4. McCrea, Rachel S.; Morgan, Byron J. T.: Analysis of capture-recapture data (2015)
  5. King, Ruth; McCrea, Rachel S.: A generalised likelihood framework for partially observed capture-recapture-recovery models (2014)
  6. Choquet, R.; Cole, D. J.: A hybrid symbolic-numerical method for determining model structure (2012)
  7. Lebreton, J. D.; Choquet, R.; Gimenez, O.: Simple estimation and test procedures in capture-mark-recapture mixed models (2012)
  8. Juillet, C.; Choquet, R.; Gauthier, G.; Pradel, R.: A capture-recapture model with double-marking, live and dead encounters, and heterogeneity of reporting due to auxiliary mark loss (2011)
  9. Rouan, L.; Choquet, R.; Pradel, R.: A general framework for modeling memory in capture-recapture data (2009)
  10. Choquet, Rémi: Automatic generation of multistate capture-recapture models (2008)
  11. Gauthier, Gilles; Lebreton, Jean-Dominique: Analysis of band-recovery data in a multistate capture-recapture framework (2008)
  12. Pradel, Roger; Maurin-Bernier, Lory; Gimenez, Olivier; Genovart, Meritxell; Choquet, Rémi; Oro, Daniel: Estimation of sex-specific survival with uncertainty in sex assessment (2008)