CoNtRol: an open source framework for the analysis of chemical reaction networks. Summary: We introduce CoNtRol, a web-based framework for analysis of chemical reaction networks (CRNs). It is designed to be both extensible and simple to use, complementing existing CRN-related tools. CoNtRol currently implements a number of necessary and/or sufficient structural tests for multiple equilibria, stable periodic orbits, convergence to equilibria and persistence, with the potential for incorporation of further tests.

References in zbMATH (referenced in 13 articles , 1 standard article )

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  1. Craciun, Gheorghe; Joshi, Badal; Pantea, Casian; Tan, Ike: Multistationarity in cyclic sequestration-transmutation networks (2022)
  2. Feliu, Elisenda; Kaihnsa, Nidhi; de Wolff, Timo; Yürük, Oğuzhan: The kinetic space of multistationarity in dual phosphorylation (2022)
  3. Torres, Angélica; Feliu, Elisenda: Symbolic proof of bistability in reaction networks (2021)
  4. Anderson, David F.; Brunner, James D.; Craciun, Gheorghe; Johnston, Matthew D.: On classes of reaction networks and their associated polynomial dynamical systems (2020)
  5. Feliu, Elisenda; Helmer, Martin: Multistationarity and bistability for fewnomial chemical reaction networks (2019)
  6. Agazzi, Andrea; Dembo, Amir; Eckmann, Jean-Pierre: Large deviations theory for Markov jump models of chemical reaction networks (2018)
  7. Brunner, James D.; Craciun, Gheorghe: Robust persistence and permanence of polynomial and power law dynamical systems (2018)
  8. Fortun, Noel T.; Mendoza, Eduardo R.; Razon, Luis F.; Lao, Angelyn R.: A deficiency-one algorithm for power-law kinetic systems with reactant-determined interactions (2018)
  9. Banaji, Murad; Pantea, Casian: Some results on injectivity and multistationarity in chemical reaction networks (2016)
  10. Johnston, Matthew D.; Pantea, Casian; Donnell, Pete: A computational approach to persistence, permanence, and endotacticity of biochemical reaction systems (2016)
  11. Obaya, Rafael; Sanz, Ana M.: Uniform and strict persistence in monotone skew-product semiflows with applications to non-autonomous Nicholson systems (2016)
  12. Conradi, Carsten; Shiu, Anne: A global convergence result for processive multisite phosphorylation systems (2015)
  13. Joshi, B.; Shiu, A.: A survey of methods for deciding whether a reaction network is multistationary (2015)