CoNtRol
CoNtRol: an open source framework for the analysis of chemical reaction networks. Summary: We introduce CoNtRol, a web-based framework for analysis of chemical reaction networks (CRNs). It is designed to be both extensible and simple to use, complementing existing CRN-related tools. CoNtRol currently implements a number of necessary and/or sufficient structural tests for multiple equilibria, stable periodic orbits, convergence to equilibria and persistence, with the potential for incorporation of further tests.
Keywords for this software
References in zbMATH (referenced in 13 articles , 1 standard article )
Showing results 1 to 13 of 13.
Sorted by year (- Craciun, Gheorghe; Joshi, Badal; Pantea, Casian; Tan, Ike: Multistationarity in cyclic sequestration-transmutation networks (2022)
- Feliu, Elisenda; Kaihnsa, Nidhi; de Wolff, Timo; Yürük, Oğuzhan: The kinetic space of multistationarity in dual phosphorylation (2022)
- Torres, Angélica; Feliu, Elisenda: Symbolic proof of bistability in reaction networks (2021)
- Anderson, David F.; Brunner, James D.; Craciun, Gheorghe; Johnston, Matthew D.: On classes of reaction networks and their associated polynomial dynamical systems (2020)
- Feliu, Elisenda; Helmer, Martin: Multistationarity and bistability for fewnomial chemical reaction networks (2019)
- Agazzi, Andrea; Dembo, Amir; Eckmann, Jean-Pierre: Large deviations theory for Markov jump models of chemical reaction networks (2018)
- Brunner, James D.; Craciun, Gheorghe: Robust persistence and permanence of polynomial and power law dynamical systems (2018)
- Fortun, Noel T.; Mendoza, Eduardo R.; Razon, Luis F.; Lao, Angelyn R.: A deficiency-one algorithm for power-law kinetic systems with reactant-determined interactions (2018)
- Banaji, Murad; Pantea, Casian: Some results on injectivity and multistationarity in chemical reaction networks (2016)
- Johnston, Matthew D.; Pantea, Casian; Donnell, Pete: A computational approach to persistence, permanence, and endotacticity of biochemical reaction systems (2016)
- Obaya, Rafael; Sanz, Ana M.: Uniform and strict persistence in monotone skew-product semiflows with applications to non-autonomous Nicholson systems (2016)
- Conradi, Carsten; Shiu, Anne: A global convergence result for processive multisite phosphorylation systems (2015)
- Joshi, B.; Shiu, A.: A survey of methods for deciding whether a reaction network is multistationary (2015)