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CollocInfer

R package CollocInfer: Collocation Inference for Dynamic Systems. These functions implement collocation-inference for continuous-time and discrete-time stochastic processes. They provide model-based smoothing, gradient-matching, generalized profiling and forwards prediction error methods.

Keywords for this software

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  • R package
  • R
  • ordinary differential equation
  • Journal of Statistical Software
  • parameter estimation
  • posterior computation
  • numerical optimization
  • maximum likelihood
  • integral-matching
  • dynamic models
  • separable least squares
  • differential equation
  • chaotic stochastic difference models
  • smoothing
  • sir
  • lotka volterra
  • profiled estimation
  • step function estimator
  • code generation
  • differential equation models
  • ordinary differential equations
  • importance sampling
  • s-system
  • collocation
  • plug-in estimators
  • arXiv_publication
  • simode
  • multimodal posterior
  • uncertainty analysis
  • synthetic likelihood topologies

  • URL: cran.r-project.org/web...
  • Code
  • InternetArchive
  • Manual: cran.r-project.org/web...
  • Authors: Giles Hooker, Luo Xiao, James Ramsay
  • Dependencies: R

  • Add information on this software.


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References in zbMATH (referenced in 6 articles , 1 standard article )

Showing results 1 to 6 of 6.
y Sorted by year (citations)

  1. Daniel Kaschek; Wolfgang Mader; Mirjam Fehling-Kaschek; Marcus Rosenblatt; Jens Timmer: Dynamic Modeling, Parameter Estimation, and Uncertainty Analysis in R (2019) not zbMATH
  2. Stojkova, Biljana Jonoska; Campbell, David A.: Incremental mixture importance sampling with shotgun optimization (2019)
  3. Rami Yaari; Itai Dattner: simode: R Package for statistical inference of ordinary differential equations using separable integral-matching (2018) arXiv
  4. Dass, Sarat C.; Lee, Jaeyong; Lee, Kyoungjae; Park, Jonghun: Laplace based approximate posterior inference for differential equation models (2017)
  5. Giles Hooker and James Ramsay and Luo Xiao: CollocInfer: Collocation Inference in Differential Equation Models (2016) not zbMATH
  6. Vujačić, Ivan; Dattner, Itai; González, Javier; Wit, Ernst: Time-course window estimator for ordinary differential equations linear in the parameters (2015)

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  • MSC classification / top
    • Top MSC classes
      • 60 Probability theory and...
      • 62 Statistics

  • Publication year
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    • 2005 - 2009
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    • before 2000
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