Darn is a RNA motif search tool. It finds all the subsequences that match a specifiedmotif on some input genomic sequence(s).Darn uses a weighted constraint solver to localize the portions of a genomic sequencethat match a motif. The motif is expressed in a specific language (see section 5). Somemotif descriptors are provided with the software for FMN, Lysine, RNaseP, SAM,snoRNA C/D-box and tRNA search.

Keywords for this software

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