BALD software. Title: Blockwise Approach using Linkage Disequilibrium information. Functions for the Genome-Wide Association Studies including simulation of SNPs data, constrained hierarchical clustering using Linkage Disequilibrium (LD) measures, the Gap statistic to find the optimal number of clusters, and statistical regression models for SNP selection (Univariate, Lasso, Group Lasso, Elastic-Net).
Keywords for this software
References in zbMATH (referenced in 2 articles )
Showing results 1 to 2 of 2.
- Chavent, Marie; Kuentz-Simonet, Vanessa; Labenne, Amaury; Saracco, Jérôme: ClustGeo: an R package for hierarchical clustering with spatial constraints (2018)
- Marie Chavent, Vanessa Kuentz-Simonet, Amaury Labenne, J. Saracco: ClustGeo: an R package for hierarchical clustering with spatial constraints. (2017) arXiv