R package SKAT: SNP-Set (Sequence) Kernel Association Test. Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
Keywords for this software
References in zbMATH (referenced in 3 articles )
Showing results 1 to 3 of 3.
- Mathieu Emily, Nicolas Sounac, Florian Kroell, Magalie Houée-Bigot: Gene-Based Methods to Detect Gene-Gene Interaction in R: The GeneGeneInteR Package (2020) not zbMATH
- Chen, Tong; Lumley, Thomas: Numerical evaluation of methods approximating the distribution of a large quadratic form in normal variables (2019)
- Wang, Xinzeng; Wang, Shudong; Meng, Xinzhu: A novel SNP-set analytical method without distinguishing common variants or rare variants in genome-wide association study (2018)