BicPAMS

BicPAMS: software for biological data analysis with pattern-based biclustering. BicPAMS is a powerful and flexible tool for the exploratory and unsupervised analysis of tabular and network data. BicPAMS integrates state-of-the-art contributions on pattern-based biclustering (including BicPAM, BicNET, BicSPAM, BiC2PAM, BiP, DeBi and BiModule). As such, BicPAMS is able to efficiently discover exhaustive and flexible structures of biclusters, with parameterizable coherency and robustness to noise and missings. BicPAMS has been successfully tested on biomedical data (including expression data, clinical data and biological networks) and social data.