LDpred: (March 2015) The LDpred software can be downloaded here. LDpred (Vilhjalmsson et al. 2015; Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores) is a method for computing polygenic risk scores from summary association statistics while accounting for LD between markers. The method infers the posterior mean causal effect size of each marker using a non-infinitesimal prior distribution on effect sizes and LD information from an external reference panel.

Keywords for this software

Anything in here will be replaced on browsers that support the canvas element

References in zbMATH (referenced in 1 article )

Showing result 1 of 1.
Sorted by year (citations)

  1. Zhao, Sihai Dave: Integrative genetic risk prediction using non-parametric empirical Bayes classification (2017)