ClusterMetric: Some notes: So far, this ’package’ consists of one programs,, and one module, treedefs. Both must be downloaded to the same folder. will find the distance between pairs of trees (if from a text file, all pairs consisting of one tree from file 1 and one tree from file 2), and a more-easily calculated upper bound for the distance, with data on the accuracy of the upper bound. will generate multiple .txt files that records the number of each upper bound/distance in a list (so 0th entry is all distance 1, 1st entry is distance 2, etc.). It will also generate a file that records how many upper bounds were accurate.

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References in zbMATH (referenced in 1 article )

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  1. Hendriksen, Michael; Francis, Andrew: A partial order and cluster-similarity metric on rooted phylogenetic trees (2020)