DomCut

DomCut: prediction of inter-domain linker regions in amino acid sequences. Summary: DomCut is a program to predict inter-domain linker regions solely by amino acid sequence information. The prediction is made by using linker index deduced from a data set of domain/linker segments. The linker preference profile, which is the averaged linker index along a sequence, can be visualized in the graphical interface. Availability: The web server, together with supplementary information, is available at http://www.kazusa.or.jp/tech/suyama/domcut. The distribution version of DomCut is also available upon request from the authors.

References in zbMATH (referenced in 3 articles )

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  1. Elloumi, Mourad (ed.); Zomaya, Albert Y. (ed.): Algorithms in computational molecular biology. Techniques approaches and applications. (2011)
  2. Chikayama, Eisuke; Kurotani, Atsushi; Tanaka, Takanori; Yabuki, Takashi; Miyazaki, Satoshi; Yokoyama, Shigeyuki; Kuroda, Yutaka: Mathematical model for empirically optimizing large scale production of soluble protein domains (2010) ioport
  3. Dong, Qiwen; Wang, Xiaolong; Lin, Lei; Xu, Zhiming: Domain boundary prediction based on profile domain linker propensity index (2006)