QTFier creates a text file containing the quasi-triangulation which is the dual structure of the Voronoi diagram of the spherical balls in the three-dimensional space. The quasi-triangulation file is extremely useful for users who want to analyze the spatial structure among spherical balls such as atoms. Once the file format explained in the report accompanying the software is understood, users can easily do many useful analyses.

References in zbMATH (referenced in 12 articles )

Showing results 1 to 12 of 12.
Sorted by year (citations)

  1. Mukundan, Manoj Kumar; Muthuganapathy, Ramanathan: A dynamic sampling approach towards computing Voronoi diagram of a set of circles (2021)
  2. Lee, Mokwon; Sugihara, Kokichi; Kim, Deok-Soo: Topology-oriented incremental algorithm for the robust construction of the Voronoi diagrams of disks (2016)
  3. Lee, Mokwon; Sugihara, Kokichi; Kim, Deok-Soo: Robust construction of the additively-weighted Voronoi diagram via topology-oriented incremental algorithm (2016)
  4. Manak, Martin; Kolingerova, Ivana: Extension of the edge tracing algorithm to disconnected Voronoi skeletons (2016)
  5. Kim, Deok-Soo; Cho, Youngsong; Kim, Jae-Kwan; Ryu, Joonghyun; Lee, Mokwon; Cha, Jehyun; Song, Chanyoung: BULL! -- the molecular geometry engine based on Voronoi diagram, quasi-triangulation, and beta-complex (2014)
  6. Anton, François; Mioc, Darka; Santos, Marcelo: Exact computation of the topology and geometric invariants of the Voronoi diagram of spheres in 3D (2013)
  7. Liao, Tao; Zhang, Yongjie; Kekenes-Huskey, Peter M.; Cheng, Yuhui; Michailova, Anushka; McCulloch, Andrew D.; Holst, Michael; McCammon, J. Andrew: Multi-core CPU or GPU-accelerated multiscale modeling for biomolecular complexes (2013)
  8. Ryu, Joonghyun; Kim, Deok-Soo: Protein structure optimization by side-chain positioning via beta-complex (2013)
  9. Kim, Deok-Soo; Cho, Youngsong; Kim, Jae-Kwan; Ryu, Joonghyun: QTF: quasi-triangulation file format (2012) ioport
  10. Kim, Deok-Soo; Kim, Jae-Kwan; Cho, Youngsong; Kim, Chong-Min: Querying simplexes in quasi-triangulation (2012) ioport
  11. Kim, Deok-Soo; Cho, Youngsong; Sugihara, Kokichi: Quasi-worlds and quasi-operators on quasi-triangulations (2010)
  12. Kim, Deok-Soo; Cho, Youngsong; Sugihara, Kokichi; Ryu, Joonghyun; Kim, Donguk: Three-dimensional beta-shapes and beta-complexes via quasi-triangulation (2010) ioport