The GROMOS Software Package for Biomolecular Simulations. GROMOS is an acronym of the GROningen MOlecular Simulation computer program package, which has been developed since 1978 for the dynamic modelling of (bio)molecules, until 1990 at the University of Groningen, The Netherlands, and since then at the ETH, the Swiss Federal Institute of Technology, in Zürich, Switzerland. Its development is driven by the research group of Wilfred van Gunsteren.

References in zbMATH (referenced in 30 articles , 1 standard article )

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  1. Friedrich, Manuel; Mainini, Edoardo; Piovano, Paolo; Stefanelli, Ulisse: Characterization of optimal carbon nanotubes under stretching and validation of the Cauchy-Born rule (2019)
  2. Mainini, Edoardo; Murakawa, H.; Piovano, Paolo; Stefanelli, Ulisse: Carbon-nanotube geometries as optimal configurations (2017)
  3. Stefanelli, Ulisse: Stable carbon configurations (2017)
  4. Friedrich, Manuel; Piovano, Paolo; Stefanelli, Ulisse: The geometry of (C_60): a rigorous approach via molecular mechanics (2016)
  5. Sun, Kwang Woong; Ambrosia, Matthew Stanley; Kwon, Tae Woo; Ha, Man Yeong: A hydrophobicity study on wavy and orthogonal textured surfaces (2016)
  6. Kumari, Sweta; Mohana Priya, Arumugam; Lulu, Sajitha; Tauqueer, Mohammad: Molecular modeling, simulation and virtual screening of ribosomal phosphoprotein P1 from \textitPlasmodiumfalciparum (2014)
  7. Almeida, Fabio C. L.; Moraes, Adolfo H.; Gomes-Neto, Francisco A. M.: An overview on protein structure determination by NMR: historical and future perspectives of the use of distance geometry methods (2013)
  8. Ruiz-Blanco, Yasser B.; Marrero-Ponce, Yovani; Paz, Waldo; García, Yamila; Salgado, Jesús: Global stability of protein folding from an empirical free energy function (2013)
  9. Xie, Jun-Yu; Ding, Guang-Hong: Studies on sensitivity to tension and gating pathway of MscL by molecular dynamic simulation (2013) ioport
  10. Yakubovich, Alexander V.; Solov’yov, Andrey V.; Greiner, Walter: Statistical mechanical theory of protein folding in water environment (2013)
  11. Lima, Angélica Nakagawa; Philot, Eric Allison; Perahia, David; Braz, Antonio Sérgio Kimus; Scott, Luis P. B.: GANM: A protein-ligand docking approach based on genetic algorithm and normal modes (2012)
  12. Lim, Teik-Cheng: Split series potential energy function (2011)
  13. Xie, Dexuan; Zarrouk, Mazen G.: Convergence analysis of truncated incomplete Hessian Newton minimization method and application in biomolecular potential energy minimization (2011)
  14. Lim, Teik-Cheng: Application of Kihara parameters in conventional molecular force fields (2010)
  15. Lim, Teik-Cheng: Approximation of the Dymond-Rigby-Smith potential function using the Lennard-Jones form (2009)
  16. Souaille, M.; Loirat, H.; Borgis, D.; Gaigeot, M. P.: MDVRY: a polarizable classical molecular dynamics package for biomolecules (2009)
  17. Zhang, Yong; Zhao, Xin; Wang, Peng-Ye: Molecular dynamics study of the fibril elongation of the prion protein fragment PrP106-126 (2007)
  18. Karawajczyk, A.; Buda, F.: The anticancer drug bleomycin investigated by density functional theory (2006)
  19. Yaşar, F.; Demir, K.: Study of two bioactive peptides in vacuum and solvent by molecular modeling (2006)
  20. Christen, Markus; Hünenberger, Philippe H.; Bakowies, Dirk; Baron, Riccardo; Bürgi, Roland; Geerke, Daan P.; Heinz, Tim N.; Kastenholz, Mika A.; Kräutler, Vincent; Oostenbrink, Chris; Peter, Christine; Trzesniak, Daniel; Van Gunsteren, Wilfred F.: The GROMOS software for biomolecular simulation: GROMOS05. (2005) ioport

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